Genetic characterization and fine mapping of susceptibility loci for sarcoidosis in African Americans on chromosome 5

Publication Description
Sarcoidosis, a systemic granulomatous disease, likely results from both environmental agents and genetic susceptibility. Sarcoidosis is more prevalent in women and, in the United States, African Americans are both more commonly and more severely affected than Caucasians. We report a follow up of the first genome scan for sarcoidosis susceptibility genes in African Americans. Both the genome scan and the present study comprise 229 African American nuclear families ascertained through two or more sibs with sarcoidosis. Regions studied included those which reached a significance in the genome scan of 0.01 (2p25, 5q11, 5q35, 9q34, 11p15 and 20q13), 0.05 (3p25 and 5p15–13) or which replicated previous findings (3p14–11). We performed genotyping with additional markers in the same families used in the genome scan. We examined multi-locus models for epistasis and performed model-based linkage analysis on subsets of the most linked families to characterize the underlying genetic model. The strongest signal was at marker D5S407 (P=0.005) on 5q11.2, using both full and half sibling pairs. Our results support, in an African American population, a sarcoidosis susceptibility gene on chromosome 5q11.2, and a gene protective for sarcoidosis on 5p15.2. These fine mapping results further prioritize the importance of candidate regions on chromosomes 2p25, 3p25, 5q35, 9q34, 11p15 and 20q13 for African Americans. Additionally, our results suggest joint action of the effects of putative genes on chromosome 3p14–11 and 5p15.2. We conclude that multiple susceptibility loci for sarcoidosis exist in African Americans and that some may have interdependent effects on disease pathogenesis.

Primary Author
Gray-McGuire,Courtney
Sinha,Ritwik
Iyengar,Sudha
Millard,Christopher
Rybicki,Benjamin
Elston,Robert
Iannuzzi,Michael

Volume
120

Issue
3

Start Page
420

Other Pages
430

Publisher
Springer-Verlag

URL
https://www.ncbi.nlm.nih.gov/pubmed/16896925

PMID
16896925



Reference Type
Journal Article

Periodical Full
Human Genetics

Publication Year
2006

Publication Date
Oct

Place of Publication
Berlin/Heidelberg

ISSN/ISBN
0340-6717

Document Object Index
10.1007/s00439-006-0201-6